Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc190Q3URK1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc190Q3URK1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc190Q3URK1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc190Q3URK1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc190Q3URK1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc190Q3URK1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc190Q3URK1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc190Q3URK1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc190Q3URK1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc190Q3URK1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc190Q3URK1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc190Q3URK1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc190Q3URK1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc190Q3URK1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc190Q3URK1 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.63■□□□□ 0.41
Ccdc190Q3URK1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc190Q3URK1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc190Q3URK1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc190Q3URK1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc190Q3URK1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc190Q3URK1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc190Q3URK1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc190Q3URK1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Ccdc190Q3URK1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc190Q3URK1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc190Q3URK1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc190Q3URK1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc190Q3URK1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc190Q3URK1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc190Q3URK1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc190Q3URK1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc190Q3URK1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc190Q3URK1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.58■□□□□ 0.41
Ccdc190Q3URK1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc190Q3URK1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc190Q3URK1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc190Q3URK1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc190Q3URK1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc190Q3URK1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc190Q3URK1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms