Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fndc4Q3TR08 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fndc4Q3TR08 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fndc4Q3TR08 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fndc4Q3TR08 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fndc4Q3TR08 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.1■□□□□ 0.33
Fndc4Q3TR08 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fndc4Q3TR08 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fndc4Q3TR08 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fndc4Q3TR08 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fndc4Q3TR08 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fndc4Q3TR08 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fndc4Q3TR08 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.09■□□□□ 0.33
Fndc4Q3TR08 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fndc4Q3TR08 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fndc4Q3TR08 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Fndc4Q3TR08 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fndc4Q3TR08 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fndc4Q3TR08 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fndc4Q3TR08 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fndc4Q3TR08 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fndc4Q3TR08 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Fndc4Q3TR08 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Fndc4Q3TR08 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Fndc4Q3TR08 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.08■□□□□ 0.32
Fndc4Q3TR08 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Fndc4Q3TR08 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Fndc4Q3TR08 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fndc4Q3TR08 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fndc4Q3TR08 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fndc4Q3TR08 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Fndc4Q3TR08 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fndc4Q3TR08 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.05■□□□□ 0.32
Fndc4Q3TR08 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Fndc4Q3TR08 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fndc4Q3TR08 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.05■□□□□ 0.32
Fndc4Q3TR08 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Fndc4Q3TR08 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fndc4Q3TR08 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fndc4Q3TR08 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fndc4Q3TR08 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fndc4Q3TR08 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fndc4Q3TR08 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fndc4Q3TR08 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms