Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd8Q09XV5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.58■□□□□ 0.56
Chd8Q09XV5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Chd8Q09XV5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd8Q09XV5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.57■□□□□ 0.56
Chd8Q09XV5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.57■□□□□ 0.56
Chd8Q09XV5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd8Q09XV5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.57■□□□□ 0.56
Chd8Q09XV5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.57■□□□□ 0.56
Chd8Q09XV5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd8Q09XV5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.56■□□□□ 0.56
Chd8Q09XV5 Gm10517-202ENSMUST00000192970 758 ntBASIC18.56■□□□□ 0.56
Chd8Q09XV5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd8Q09XV5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.56■□□□□ 0.56
Chd8Q09XV5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Chd8Q09XV5 Gm43530-201ENSMUST00000195920 274 ntBASIC18.56■□□□□ 0.56
Chd8Q09XV5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd8Q09XV5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd8Q09XV5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd8Q09XV5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.55■□□□□ 0.56
Chd8Q09XV5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd8Q09XV5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd8Q09XV5 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.55■□□□□ 0.56
Chd8Q09XV5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chd8Q09XV5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd8Q09XV5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd8Q09XV5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd8Q09XV5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.54■□□□□ 0.56
Chd8Q09XV5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd8Q09XV5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd8Q09XV5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd8Q09XV5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.54■□□□□ 0.56
Chd8Q09XV5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.54■□□□□ 0.56
Chd8Q09XV5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Chd8Q09XV5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Chd8Q09XV5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd8Q09XV5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd8Q09XV5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.53■□□□□ 0.56
Chd8Q09XV5 Gm37055-201ENSMUST00000191866 133 ntBASIC18.53■□□□□ 0.56
Chd8Q09XV5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.53■□□□□ 0.56
Chd8Q09XV5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chd8Q09XV5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd8Q09XV5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.52■□□□□ 0.56
Chd8Q09XV5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd8Q09XV5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd8Q09XV5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Chd8Q09XV5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd8Q09XV5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.52■□□□□ 0.56
Chd8Q09XV5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd8Q09XV5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Gm11249-201ENSMUST00000117071 859 ntBASIC18.51■□□□□ 0.55
Chd8Q09XV5 Gm5643-201ENSMUST00000117081 966 ntBASIC18.51■□□□□ 0.55
Chd8Q09XV5 Gm6433-201ENSMUST00000118634 875 ntBASIC18.51■□□□□ 0.55
Chd8Q09XV5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd8Q09XV5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd8Q09XV5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd8Q09XV5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd8Q09XV5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.49■□□□□ 0.55
Chd8Q09XV5 Gm10231-201ENSMUST00000181584 441 ntBASIC18.49■□□□□ 0.55
Chd8Q09XV5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd8Q09XV5 Gm10175-202ENSMUST00000208752 441 ntBASIC18.49■□□□□ 0.55
Chd8Q09XV5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd8Q09XV5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd8Q09XV5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd8Q09XV5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Chd8Q09XV5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd8Q09XV5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd8Q09XV5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd8Q09XV5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd8Q09XV5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd8Q09XV5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd8Q09XV5 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.48■□□□□ 0.55
Chd8Q09XV5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chd8Q09XV5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd8Q09XV5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd8Q09XV5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.47■□□□□ 0.55
Chd8Q09XV5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Chd8Q09XV5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Chd8Q09XV5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chd8Q09XV5 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.47■□□□□ 0.55
Chd8Q09XV5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd8Q09XV5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd8Q09XV5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd8Q09XV5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd8Q09XV5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms