Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cdh6P97326 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh6P97326 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh6P97326 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh6P97326 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cdh6P97326 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh6P97326 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.52■□□□□ 0.88
Cdh6P97326 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.52■□□□□ 0.88
Cdh6P97326 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cdh6P97326 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.52■□□□□ 0.88
Cdh6P97326 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.51■□□□□ 0.87
Cdh6P97326 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdh6P97326 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdh6P97326 Golgb1-201ENSMUST00000023534 498 ntBASIC20.51■□□□□ 0.87
Cdh6P97326 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cdh6P97326 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh6P97326 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.5■□□□□ 0.87
Cdh6P97326 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh6P97326 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh6P97326 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh6P97326 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cdh6P97326 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh6P97326 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh6P97326 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.48■□□□□ 0.87
Cdh6P97326 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cdh6P97326 Gm9847-201ENSMUST00000052528 599 ntBASIC20.48■□□□□ 0.87
Cdh6P97326 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.48■□□□□ 0.87
Cdh6P97326 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cdh6P97326 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Cdh6P97326 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh6P97326 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Cdh6P97326 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh6P97326 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh6P97326 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh6P97326 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh6P97326 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh6P97326 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh6P97326 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh6P97326 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh6P97326 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cdh6P97326 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cdh6P97326 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.46■□□□□ 0.87
Cdh6P97326 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh6P97326 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cdh6P97326 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh6P97326 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh6P97326 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh6P97326 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh6P97326 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh6P97326 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cdh6P97326 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh6P97326 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh6P97326 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh6P97326 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cdh6P97326 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cdh6P97326 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh6P97326 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh6P97326 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh6P97326 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh6P97326 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh6P97326 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cdh6P97326 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh6P97326 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms