Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.56■□□□□ 0.56
SgcdP82347 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SgcdP82347 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SgcdP82347 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcdP82347 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcdP82347 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcdP82347 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcdP82347 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcdP82347 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcdP82347 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.55■□□□□ 0.56
SgcdP82347 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcdP82347 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcdP82347 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SgcdP82347 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.55■□□□□ 0.56
SgcdP82347 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SgcdP82347 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcdP82347 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SgcdP82347 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcdP82347 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcdP82347 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SgcdP82347 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.54■□□□□ 0.56
SgcdP82347 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SgcdP82347 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SgcdP82347 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.54■□□□□ 0.56
SgcdP82347 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SgcdP82347 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SgcdP82347 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcdP82347 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.54■□□□□ 0.56
SgcdP82347 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SgcdP82347 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcdP82347 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.54■□□□□ 0.56
SgcdP82347 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SgcdP82347 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcdP82347 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SgcdP82347 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcdP82347 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcdP82347 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcdP82347 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.53■□□□□ 0.56
SgcdP82347 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SgcdP82347 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.53■□□□□ 0.56
SgcdP82347 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SgcdP82347 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcdP82347 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcdP82347 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SgcdP82347 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SgcdP82347 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.52■□□□□ 0.56
SgcdP82347 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcdP82347 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SgcdP82347 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SgcdP82347 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcdP82347 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SgcdP82347 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SgcdP82347 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SgcdP82347 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.51■□□□□ 0.55
SgcdP82347 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.51■□□□□ 0.55
SgcdP82347 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcdP82347 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.51■□□□□ 0.55
SgcdP82347 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SgcdP82347 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SgcdP82347 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.51■□□□□ 0.55
SgcdP82347 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcdP82347 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SgcdP82347 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SgcdP82347 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.5■□□□□ 0.55
SgcdP82347 Gm14117-201ENSMUST00000122417 843 ntBASIC18.5■□□□□ 0.55
SgcdP82347 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SgcdP82347 Gm43566-201ENSMUST00000196851 808 ntBASIC18.5■□□□□ 0.55
SgcdP82347 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.5■□□□□ 0.55
SgcdP82347 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.5■□□□□ 0.55
SgcdP82347 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcdP82347 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SgcdP82347 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcdP82347 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SgcdP82347 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcdP82347 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SgcdP82347 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcdP82347 Gm13238-201ENSMUST00000117655 780 ntBASIC18.49■□□□□ 0.55
SgcdP82347 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SgcdP82347 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcdP82347 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.49■□□□□ 0.55
SgcdP82347 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcdP82347 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcdP82347 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms