Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube2d3P61079 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.41□□□□□ -0.1
Ube2d3P61079 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.41□□□□□ -0.1
Ube2d3P61079 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube2d3P61079 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube2d3P61079 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ube2d3P61079 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.4□□□□□ -0.1
Ube2d3P61079 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube2d3P61079 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube2d3P61079 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ube2d3P61079 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.39□□□□□ -0.11
Ube2d3P61079 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ube2d3P61079 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.39□□□□□ -0.11
Ube2d3P61079 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.39□□□□□ -0.11
Ube2d3P61079 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube2d3P61079 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ube2d3P61079 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube2d3P61079 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.38□□□□□ -0.11
Ube2d3P61079 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube2d3P61079 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube2d3P61079 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube2d3P61079 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 Gm43566-201ENSMUST00000196851 808 ntBASIC14.37□□□□□ -0.11
Ube2d3P61079 Gm5921-201ENSMUST00000075898 882 ntBASIC14.37□□□□□ -0.11
Ube2d3P61079 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube2d3P61079 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ube2d3P61079 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ube2d3P61079 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ube2d3P61079 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube2d3P61079 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ube2d3P61079 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ube2d3P61079 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ube2d3P61079 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.35□□□□□ -0.11
Ube2d3P61079 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ube2d3P61079 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube2d3P61079 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2d3P61079 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2d3P61079 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2d3P61079 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2d3P61079 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube2d3P61079 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms