Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ythdf1P59326 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ythdf1P59326 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ythdf1P59326 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ythdf1P59326 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ythdf1P59326 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ythdf1P59326 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ythdf1P59326 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ythdf1P59326 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ythdf1P59326 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ythdf1P59326 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ythdf1P59326 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ythdf1P59326 Golph3-205ENSMUST00000228671 2842 ntBASIC19.51■□□□□ 0.71
Ythdf1P59326 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ythdf1P59326 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.5■□□□□ 0.71
Ythdf1P59326 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ythdf1P59326 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ythdf1P59326 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ythdf1P59326 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ythdf1P59326 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ythdf1P59326 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ythdf1P59326 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ythdf1P59326 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ythdf1P59326 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.49■□□□□ 0.71
Ythdf1P59326 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ythdf1P59326 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ythdf1P59326 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ythdf1P59326 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ythdf1P59326 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ythdf1P59326 Gm6821-201ENSMUST00000107540 542 ntBASIC19.49■□□□□ 0.71
Ythdf1P59326 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ythdf1P59326 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ythdf1P59326 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ythdf1P59326 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.48■□□□□ 0.71
Ythdf1P59326 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ythdf1P59326 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ythdf1P59326 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.48■□□□□ 0.71
Ythdf1P59326 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ythdf1P59326 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ythdf1P59326 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ythdf1P59326 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ythdf1P59326 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ythdf1P59326 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ythdf1P59326 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ythdf1P59326 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ythdf1P59326 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Ythdf1P59326 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ythdf1P59326 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ythdf1P59326 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ythdf1P59326 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ythdf1P59326 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ythdf1P59326 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ythdf1P59326 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.46■□□□□ 0.71
Ythdf1P59326 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ythdf1P59326 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.45■□□□□ 0.7
Ythdf1P59326 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.45■□□□□ 0.7
Ythdf1P59326 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Ythdf1P59326 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ythdf1P59326 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ythdf1P59326 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ythdf1P59326 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ythdf1P59326 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ythdf1P59326 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ythdf1P59326 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ythdf1P59326 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ythdf1P59326 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ythdf1P59326 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ythdf1P59326 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ythdf1P59326 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ythdf1P59326 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ythdf1P59326 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.42■□□□□ 0.7
Ythdf1P59326 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ythdf1P59326 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Ythdf1P59326 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.42■□□□□ 0.7
Ythdf1P59326 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ythdf1P59326 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ythdf1P59326 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ythdf1P59326 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ythdf1P59326 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ythdf1P59326 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ythdf1P59326 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ythdf1P59326 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms