Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sssca1P56873 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.3■□□□□ 0.2
Sssca1P56873 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sssca1P56873 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sssca1P56873 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sssca1P56873 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sssca1P56873 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sssca1P56873 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sssca1P56873 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sssca1P56873 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sssca1P56873 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sssca1P56873 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sssca1P56873 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.29■□□□□ 0.2
Sssca1P56873 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.29■□□□□ 0.2
Sssca1P56873 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.29■□□□□ 0.2
Sssca1P56873 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.29■□□□□ 0.2
Sssca1P56873 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sssca1P56873 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sssca1P56873 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sssca1P56873 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sssca1P56873 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sssca1P56873 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.28■□□□□ 0.2
Sssca1P56873 Gm12366-201ENSMUST00000121722 873 ntBASIC16.28■□□□□ 0.2
Sssca1P56873 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.28■□□□□ 0.2
Sssca1P56873 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sssca1P56873 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sssca1P56873 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sssca1P56873 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.28■□□□□ 0.2
Sssca1P56873 Gm5786-201ENSMUST00000085368 882 ntBASIC16.28■□□□□ 0.2
Sssca1P56873 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sssca1P56873 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sssca1P56873 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sssca1P56873 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sssca1P56873 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sssca1P56873 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sssca1P56873 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Sssca1P56873 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sssca1P56873 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sssca1P56873 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sssca1P56873 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sssca1P56873 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sssca1P56873 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sssca1P56873 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sssca1P56873 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Sssca1P56873 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sssca1P56873 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.26■□□□□ 0.19
Sssca1P56873 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.26■□□□□ 0.19
Sssca1P56873 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sssca1P56873 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Sssca1P56873 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sssca1P56873 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sssca1P56873 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sssca1P56873 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sssca1P56873 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sssca1P56873 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.26■□□□□ 0.19
Sssca1P56873 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sssca1P56873 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sssca1P56873 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sssca1P56873 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Sssca1P56873 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sssca1P56873 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sssca1P56873 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sssca1P56873 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sssca1P56873 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sssca1P56873 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sssca1P56873 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sssca1P56873 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sssca1P56873 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sssca1P56873 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sssca1P56873 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sssca1P56873 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sssca1P56873 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sssca1P56873 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sssca1P56873 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.24■□□□□ 0.19
Sssca1P56873 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sssca1P56873 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sssca1P56873 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.24■□□□□ 0.19
Sssca1P56873 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sssca1P56873 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sssca1P56873 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sssca1P56873 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sssca1P56873 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms