Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Hmgcs2P54869 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Hmgcs2P54869 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Hmgcs2P54869 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Hmgcs2P54869 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Hmgcs2P54869 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.73■■□□□ 1.23
Hmgcs2P54869 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Hmgcs2P54869 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Hmgcs2P54869 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hmgcs2P54869 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hmgcs2P54869 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hmgcs2P54869 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Hmgcs2P54869 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Hmgcs2P54869 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.72■■□□□ 1.23
Hmgcs2P54869 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hmgcs2P54869 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hmgcs2P54869 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.72■■□□□ 1.23
Hmgcs2P54869 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hmgcs2P54869 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hmgcs2P54869 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hmgcs2P54869 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hmgcs2P54869 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.71■■□□□ 1.23
Hmgcs2P54869 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hmgcs2P54869 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Hmgcs2P54869 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hmgcs2P54869 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hmgcs2P54869 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hmgcs2P54869 Gm37179-201ENSMUST00000194862 823 ntBASIC22.7■■□□□ 1.22
Hmgcs2P54869 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.7■■□□□ 1.22
Hmgcs2P54869 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.7■■□□□ 1.22
Hmgcs2P54869 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hmgcs2P54869 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Hmgcs2P54869 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hmgcs2P54869 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Hmgcs2P54869 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hmgcs2P54869 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Hmgcs2P54869 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.69■■□□□ 1.22
Hmgcs2P54869 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Hmgcs2P54869 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.68■■□□□ 1.22
Hmgcs2P54869 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
Hmgcs2P54869 Gm11421-201ENSMUST00000122124 294 ntBASIC22.67■■□□□ 1.22
Hmgcs2P54869 Gm18671-201ENSMUST00000214826 683 ntBASIC22.67■■□□□ 1.22
Hmgcs2P54869 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hmgcs2P54869 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
Hmgcs2P54869 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Hmgcs2P54869 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hmgcs2P54869 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hmgcs2P54869 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.66■■□□□ 1.22
Hmgcs2P54869 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hmgcs2P54869 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.66■■□□□ 1.22
Hmgcs2P54869 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hmgcs2P54869 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hmgcs2P54869 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hmgcs2P54869 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hmgcs2P54869 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hmgcs2P54869 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Hmgcs2P54869 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hmgcs2P54869 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Gm10033-202ENSMUST00000211874 928 ntBASIC22.65■■□□□ 1.22
Hmgcs2P54869 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hmgcs2P54869 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Hmgcs2P54869 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.64■■□□□ 1.21
Hmgcs2P54869 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Hmgcs2P54869 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.64■■□□□ 1.21
Hmgcs2P54869 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hmgcs2P54869 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Hmgcs2P54869 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hmgcs2P54869 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.64■■□□□ 1.21
Hmgcs2P54869 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hmgcs2P54869 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hmgcs2P54869 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hmgcs2P54869 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.63■■□□□ 1.21
Hmgcs2P54869 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.63■■□□□ 1.21
Hmgcs2P54869 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Hmgcs2P54869 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hmgcs2P54869 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hmgcs2P54869 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.63■■□□□ 1.21
Hmgcs2P54869 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hmgcs2P54869 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hmgcs2P54869 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hmgcs2P54869 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hmgcs2P54869 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Hmgcs2P54869 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Hmgcs2P54869 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms