Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SftpbP50405 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SftpbP50405 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SftpbP50405 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SftpbP50405 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.68■□□□□ 0.9
SftpbP50405 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SftpbP50405 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SftpbP50405 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SftpbP50405 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SftpbP50405 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SftpbP50405 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SftpbP50405 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SftpbP50405 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SftpbP50405 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SftpbP50405 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SftpbP50405 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SftpbP50405 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SftpbP50405 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SftpbP50405 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SftpbP50405 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SftpbP50405 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SftpbP50405 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.66■□□□□ 0.9
SftpbP50405 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SftpbP50405 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SftpbP50405 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SftpbP50405 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SftpbP50405 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SftpbP50405 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SftpbP50405 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SftpbP50405 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.65■□□□□ 0.9
SftpbP50405 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SftpbP50405 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
SftpbP50405 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SftpbP50405 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.65■□□□□ 0.9
SftpbP50405 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SftpbP50405 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.65■□□□□ 0.9
SftpbP50405 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SftpbP50405 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SftpbP50405 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SftpbP50405 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.65■□□□□ 0.9
SftpbP50405 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SftpbP50405 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SftpbP50405 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SftpbP50405 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SftpbP50405 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.64■□□□□ 0.89
SftpbP50405 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.64■□□□□ 0.89
SftpbP50405 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SftpbP50405 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SftpbP50405 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SftpbP50405 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SftpbP50405 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SftpbP50405 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SftpbP50405 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SftpbP50405 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SftpbP50405 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.63■□□□□ 0.89
SftpbP50405 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SftpbP50405 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SftpbP50405 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SftpbP50405 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.63■□□□□ 0.89
SftpbP50405 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SftpbP50405 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SftpbP50405 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SftpbP50405 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SftpbP50405 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SftpbP50405 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SftpbP50405 Gm5921-201ENSMUST00000075898 882 ntBASIC20.62■□□□□ 0.89
SftpbP50405 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SftpbP50405 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SftpbP50405 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SftpbP50405 Gm43566-201ENSMUST00000196851 808 ntBASIC20.61■□□□□ 0.89
SftpbP50405 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SftpbP50405 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SftpbP50405 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SftpbP50405 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.6■□□□□ 0.89
SftpbP50405 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SftpbP50405 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SftpbP50405 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SftpbP50405 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SftpbP50405 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SftpbP50405 Iqck-206ENSMUST00000208658 2891 ntBASIC20.59■□□□□ 0.89
SftpbP50405 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
SftpbP50405 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SftpbP50405 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SftpbP50405 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SftpbP50405 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SftpbP50405 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SftpbP50405 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SftpbP50405 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SftpbP50405 Golph3-202ENSMUST00000226517 2359 ntBASIC20.58■□□□□ 0.89
SftpbP50405 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SftpbP50405 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SftpbP50405 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SftpbP50405 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SftpbP50405 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.58■□□□□ 0.88
SftpbP50405 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.58■□□□□ 0.88
SftpbP50405 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SftpbP50405 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SftpbP50405 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SftpbP50405 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SftpbP50405 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms