Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GdnfP48540 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.61■□□□□ 0.41
GdnfP48540 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GdnfP48540 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.6■□□□□ 0.41
GdnfP48540 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
GdnfP48540 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Gm43566-201ENSMUST00000196851 808 ntBASIC17.6■□□□□ 0.41
GdnfP48540 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GdnfP48540 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GdnfP48540 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.59■□□□□ 0.41
GdnfP48540 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GdnfP48540 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GdnfP48540 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GdnfP48540 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.59■□□□□ 0.41
GdnfP48540 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.59■□□□□ 0.41
GdnfP48540 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GdnfP48540 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GdnfP48540 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GdnfP48540 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GdnfP48540 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
GdnfP48540 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
GdnfP48540 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.58■□□□□ 0.41
GdnfP48540 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.58■□□□□ 0.41
GdnfP48540 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GdnfP48540 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GdnfP48540 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GdnfP48540 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GdnfP48540 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
GdnfP48540 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GdnfP48540 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GdnfP48540 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.57■□□□□ 0.4
GdnfP48540 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.57■□□□□ 0.4
GdnfP48540 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GdnfP48540 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GdnfP48540 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.56■□□□□ 0.4
GdnfP48540 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.56■□□□□ 0.4
GdnfP48540 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.56■□□□□ 0.4
GdnfP48540 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.56■□□□□ 0.4
GdnfP48540 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GdnfP48540 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.55■□□□□ 0.4
GdnfP48540 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
GdnfP48540 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GdnfP48540 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.54■□□□□ 0.4
GdnfP48540 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GdnfP48540 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
GdnfP48540 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.54■□□□□ 0.4
GdnfP48540 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GdnfP48540 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GdnfP48540 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GdnfP48540 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GdnfP48540 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GdnfP48540 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.54■□□□□ 0.4
GdnfP48540 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
GdnfP48540 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GdnfP48540 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GdnfP48540 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GdnfP48540 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.53■□□□□ 0.4
GdnfP48540 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GdnfP48540 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.53■□□□□ 0.4
GdnfP48540 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.53■□□□□ 0.4
GdnfP48540 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
GdnfP48540 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms