Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RxrbP28704 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RxrbP28704 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.34■□□□□ 0.85
RxrbP28704 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
RxrbP28704 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RxrbP28704 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RxrbP28704 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RxrbP28704 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RxrbP28704 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RxrbP28704 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RxrbP28704 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RxrbP28704 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RxrbP28704 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RxrbP28704 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RxrbP28704 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RxrbP28704 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RxrbP28704 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.32■□□□□ 0.84
RxrbP28704 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RxrbP28704 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RxrbP28704 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RxrbP28704 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RxrbP28704 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RxrbP28704 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RxrbP28704 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.31■□□□□ 0.84
RxrbP28704 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RxrbP28704 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RxrbP28704 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.31■□□□□ 0.84
RxrbP28704 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RxrbP28704 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RxrbP28704 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RxrbP28704 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RxrbP28704 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RxrbP28704 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RxrbP28704 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RxrbP28704 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RxrbP28704 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RxrbP28704 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RxrbP28704 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RxrbP28704 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RxrbP28704 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RxrbP28704 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.29■□□□□ 0.84
RxrbP28704 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RxrbP28704 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.29■□□□□ 0.84
RxrbP28704 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RxrbP28704 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RxrbP28704 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RxrbP28704 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RxrbP28704 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RxrbP28704 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RxrbP28704 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RxrbP28704 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RxrbP28704 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RxrbP28704 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RxrbP28704 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RxrbP28704 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RxrbP28704 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RxrbP28704 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RxrbP28704 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RxrbP28704 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RxrbP28704 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RxrbP28704 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RxrbP28704 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.27■□□□□ 0.84
RxrbP28704 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RxrbP28704 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RxrbP28704 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RxrbP28704 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RxrbP28704 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RxrbP28704 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.27■□□□□ 0.83
RxrbP28704 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RxrbP28704 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RxrbP28704 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RxrbP28704 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RxrbP28704 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.26■□□□□ 0.83
RxrbP28704 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RxrbP28704 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RxrbP28704 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RxrbP28704 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
RxrbP28704 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RxrbP28704 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.26■□□□□ 0.83
RxrbP28704 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RxrbP28704 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RxrbP28704 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
RxrbP28704 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RxrbP28704 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RxrbP28704 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.25■□□□□ 0.83
RxrbP28704 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
RxrbP28704 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.25■□□□□ 0.83
RxrbP28704 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RxrbP28704 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RxrbP28704 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
RxrbP28704 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RxrbP28704 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RxrbP28704 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms