Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl6P27784 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccl6P27784 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl6P27784 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl6P27784 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccl6P27784 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.71■□□□□ 0.1
Ccl6P27784 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccl6P27784 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Ccl6P27784 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccl6P27784 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl6P27784 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl6P27784 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl6P27784 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccl6P27784 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccl6P27784 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl6P27784 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl6P27784 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl6P27784 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccl6P27784 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccl6P27784 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl6P27784 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl6P27784 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccl6P27784 Gm7417-201ENSMUST00000192950 473 ntBASIC15.69■□□□□ 0.1
Ccl6P27784 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.69■□□□□ 0.1
Ccl6P27784 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccl6P27784 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Ccl6P27784 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
Ccl6P27784 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl6P27784 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl6P27784 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl6P27784 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccl6P27784 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.68■□□□□ 0.1
Ccl6P27784 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccl6P27784 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl6P27784 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl6P27784 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ccl6P27784 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccl6P27784 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ccl6P27784 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccl6P27784 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccl6P27784 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Ccl6P27784 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccl6P27784 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccl6P27784 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl6P27784 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl6P27784 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ccl6P27784 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccl6P27784 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.66■□□□□ 0.1
Ccl6P27784 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl6P27784 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl6P27784 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl6P27784 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl6P27784 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl6P27784 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.65■□□□□ 0.1
Ccl6P27784 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl6P27784 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl6P27784 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl6P27784 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl6P27784 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl6P27784 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Gm14117-201ENSMUST00000122417 843 ntBASIC15.64■□□□□ 0.09
Ccl6P27784 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.64■□□□□ 0.09
Ccl6P27784 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl6P27784 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Ccl6P27784 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl6P27784 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl6P27784 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl6P27784 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl6P27784 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ccl6P27784 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Ccl6P27784 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl6P27784 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl6P27784 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl6P27784 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl6P27784 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl6P27784 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl6P27784 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl6P27784 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms