Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PrnpP04925 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PrnpP04925 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PrnpP04925 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PrnpP04925 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PrnpP04925 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PrnpP04925 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PrnpP04925 Gm11421-201ENSMUST00000122124 294 ntBASIC21.15■□□□□ 0.98
PrnpP04925 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PrnpP04925 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PrnpP04925 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PrnpP04925 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PrnpP04925 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PrnpP04925 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PrnpP04925 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PrnpP04925 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PrnpP04925 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PrnpP04925 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PrnpP04925 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PrnpP04925 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PrnpP04925 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PrnpP04925 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PrnpP04925 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PrnpP04925 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PrnpP04925 Gm18671-201ENSMUST00000214826 683 ntBASIC21.13■□□□□ 0.97
PrnpP04925 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PrnpP04925 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PrnpP04925 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.12■□□□□ 0.97
PrnpP04925 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PrnpP04925 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PrnpP04925 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PrnpP04925 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.12■□□□□ 0.97
PrnpP04925 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PrnpP04925 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PrnpP04925 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PrnpP04925 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.11■□□□□ 0.97
PrnpP04925 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PrnpP04925 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PrnpP04925 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.11■□□□□ 0.97
PrnpP04925 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PrnpP04925 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PrnpP04925 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PrnpP04925 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.1■□□□□ 0.97
PrnpP04925 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PrnpP04925 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PrnpP04925 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PrnpP04925 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PrnpP04925 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PrnpP04925 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
PrnpP04925 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.09■□□□□ 0.97
PrnpP04925 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PrnpP04925 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PrnpP04925 Mir6236-201ENSMUST00000184437 123 ntBASIC21.09■□□□□ 0.97
PrnpP04925 Gm37179-201ENSMUST00000194862 823 ntBASIC21.09■□□□□ 0.97
PrnpP04925 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PrnpP04925 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PrnpP04925 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PrnpP04925 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PrnpP04925 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.09■□□□□ 0.97
PrnpP04925 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PrnpP04925 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.08■□□□□ 0.97
PrnpP04925 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PrnpP04925 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PrnpP04925 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PrnpP04925 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PrnpP04925 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PrnpP04925 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PrnpP04925 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PrnpP04925 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PrnpP04925 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PrnpP04925 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PrnpP04925 Gm42778-201ENSMUST00000199644 553 ntBASIC21.07■□□□□ 0.96
PrnpP04925 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PrnpP04925 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PrnpP04925 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PrnpP04925 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PrnpP04925 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PrnpP04925 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 AV356131-201ENSMUST00000206201 750 ntBASIC21.06■□□□□ 0.96
PrnpP04925 Gm10033-202ENSMUST00000211874 928 ntBASIC21.06■□□□□ 0.96
PrnpP04925 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PrnpP04925 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PrnpP04925 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PrnpP04925 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PrnpP04925 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PrnpP04925 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PrnpP04925 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.05■□□□□ 0.96
PrnpP04925 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.05■□□□□ 0.96
PrnpP04925 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.05■□□□□ 0.96
PrnpP04925 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PrnpP04925 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PrnpP04925 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms