Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Hbb-b1P02088 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.27□□□□□ -0.12
Hbb-b1P02088 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hbb-b1P02088 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hbb-b1P02088 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.27□□□□□ -0.12
Hbb-b1P02088 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.27□□□□□ -0.13
Hbb-b1P02088 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hbb-b1P02088 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hbb-b1P02088 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hbb-b1P02088 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hbb-b1P02088 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.24□□□□□ -0.13
Hbb-b1P02088 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hbb-b1P02088 Golph3-205ENSMUST00000228671 2842 ntBASIC14.23□□□□□ -0.13
Hbb-b1P02088 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.23□□□□□ -0.13
Hbb-b1P02088 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms