Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IghmP01872 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.03■□□□□ 0.64
IghmP01872 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
IghmP01872 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.03■□□□□ 0.64
IghmP01872 Gm40881-201ENSMUST00000223397 166 ntBASIC19.03■□□□□ 0.64
IghmP01872 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
IghmP01872 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IghmP01872 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IghmP01872 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
IghmP01872 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IghmP01872 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IghmP01872 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IghmP01872 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IghmP01872 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IghmP01872 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IghmP01872 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
IghmP01872 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.02■□□□□ 0.64
IghmP01872 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.02■□□□□ 0.64
IghmP01872 Gm7143-201ENSMUST00000222811 859 ntBASIC19.02■□□□□ 0.64
IghmP01872 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IghmP01872 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IghmP01872 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
IghmP01872 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.01■□□□□ 0.63
IghmP01872 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IghmP01872 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
IghmP01872 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.01■□□□□ 0.63
IghmP01872 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IghmP01872 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IghmP01872 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
IghmP01872 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IghmP01872 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IghmP01872 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19■□□□□ 0.63
IghmP01872 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19■□□□□ 0.63
IghmP01872 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IghmP01872 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
IghmP01872 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19■□□□□ 0.63
IghmP01872 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19■□□□□ 0.63
IghmP01872 Gm15043-201ENSMUST00000118843 1543 ntBASIC19■□□□□ 0.63
IghmP01872 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IghmP01872 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IghmP01872 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IghmP01872 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IghmP01872 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
IghmP01872 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IghmP01872 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IghmP01872 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IghmP01872 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
IghmP01872 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IghmP01872 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IghmP01872 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IghmP01872 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IghmP01872 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IghmP01872 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IghmP01872 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IghmP01872 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IghmP01872 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IghmP01872 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IghmP01872 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
IghmP01872 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.97■□□□□ 0.63
IghmP01872 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IghmP01872 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IghmP01872 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IghmP01872 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IghmP01872 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.96■□□□□ 0.63
IghmP01872 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.96■□□□□ 0.63
IghmP01872 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IghmP01872 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IghmP01872 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IghmP01872 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IghmP01872 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IghmP01872 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IghmP01872 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IghmP01872 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
IghmP01872 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
IghmP01872 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
IghmP01872 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IghmP01872 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IghmP01872 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IghmP01872 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IghmP01872 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IghmP01872 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IghmP01872 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IghmP01872 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
IghmP01872 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.93■□□□□ 0.62
IghmP01872 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.93■□□□□ 0.62
IghmP01872 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
IghmP01872 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IghmP01872 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.92■□□□□ 0.62
IghmP01872 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.92■□□□□ 0.62
IghmP01872 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IghmP01872 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IghmP01872 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms