Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.57■□□□□ 0.4
Igh-VJ558P01758 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-VJ558P01758 Etf1-202ENSMUST00000180351 108 ntBASIC17.57■□□□□ 0.4
Igh-VJ558P01758 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-VJ558P01758 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-VJ558P01758 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Igh-VJ558P01758 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igh-VJ558P01758 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-VJ558P01758 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.56■□□□□ 0.4
Igh-VJ558P01758 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-VJ558P01758 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-VJ558P01758 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-VJ558P01758 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-VJ558P01758 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.56■□□□□ 0.4
Igh-VJ558P01758 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-VJ558P01758 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Igh-VJ558P01758 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igh-VJ558P01758 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igh-VJ558P01758 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Notumos-201ENSMUST00000151998 2659 ntBASIC17.54■□□□□ 0.4
Igh-VJ558P01758 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-VJ558P01758 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-VJ558P01758 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-VJ558P01758 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.53■□□□□ 0.4
Igh-VJ558P01758 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-VJ558P01758 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igh-VJ558P01758 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Igh-VJ558P01758 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-VJ558P01758 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Igh-VJ558P01758 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igh-VJ558P01758 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.52■□□□□ 0.4
Igh-VJ558P01758 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.52■□□□□ 0.4
Igh-VJ558P01758 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Igh-VJ558P01758 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igh-VJ558P01758 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.52■□□□□ 0.39
Igh-VJ558P01758 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igh-VJ558P01758 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Igh-VJ558P01758 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Igh-VJ558P01758 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igh-VJ558P01758 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Igh-VJ558P01758 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Gm43530-201ENSMUST00000195920 274 ntBASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Igh-VJ558P01758 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Gm22238-201ENSMUST00000175222 88 ntBASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igh-VJ558P01758 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Igh-VJ558P01758 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms