Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.23□□□□□ -0.13
Sh2d1aO88890 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Gm10399-202ENSMUST00000202768 748 ntBASIC14.22□□□□□ -0.13
Sh2d1aO88890 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh2d1aO88890 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh2d1aO88890 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh2d1aO88890 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh2d1aO88890 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh2d1aO88890 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh2d1aO88890 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh2d1aO88890 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.21□□□□□ -0.13
Sh2d1aO88890 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh2d1aO88890 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sh2d1aO88890 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sh2d1aO88890 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh2d1aO88890 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.19□□□□□ -0.14
Sh2d1aO88890 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh2d1aO88890 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.18□□□□□ -0.14
Sh2d1aO88890 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.18□□□□□ -0.14
Sh2d1aO88890 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Sh2d1aO88890 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh2d1aO88890 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sh2d1aO88890 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh2d1aO88890 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d1aO88890 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh2d1aO88890 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.17□□□□□ -0.14
Sh2d1aO88890 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d1aO88890 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh2d1aO88890 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sh2d1aO88890 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.16□□□□□ -0.14
Sh2d1aO88890 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d1aO88890 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d1aO88890 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d1aO88890 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.16□□□□□ -0.14
Sh2d1aO88890 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.16□□□□□ -0.14
Sh2d1aO88890 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sh2d1aO88890 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sh2d1aO88890 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Sh2d1aO88890 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms