Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pdlim3O70209 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pdlim3O70209 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim3O70209 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.32■□□□□ 0.52
Pdlim3O70209 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim3O70209 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim3O70209 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.31■□□□□ 0.52
Pdlim3O70209 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.31■□□□□ 0.52
Pdlim3O70209 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pdlim3O70209 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim3O70209 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.3■□□□□ 0.52
Pdlim3O70209 Gm12366-201ENSMUST00000121722 873 ntBASIC18.3■□□□□ 0.52
Pdlim3O70209 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.3■□□□□ 0.52
Pdlim3O70209 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.3■□□□□ 0.52
Pdlim3O70209 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.3■□□□□ 0.52
Pdlim3O70209 Gm5786-201ENSMUST00000085368 882 ntBASIC18.3■□□□□ 0.52
Pdlim3O70209 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim3O70209 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.29■□□□□ 0.52
Pdlim3O70209 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.29■□□□□ 0.52
Pdlim3O70209 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pdlim3O70209 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim3O70209 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim3O70209 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.28■□□□□ 0.52
Pdlim3O70209 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim3O70209 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pdlim3O70209 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim3O70209 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim3O70209 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pdlim3O70209 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim3O70209 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.27■□□□□ 0.52
Pdlim3O70209 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim3O70209 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pdlim3O70209 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim3O70209 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Pdlim3O70209 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim3O70209 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.27■□□□□ 0.51
Pdlim3O70209 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pdlim3O70209 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.26■□□□□ 0.51
Pdlim3O70209 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.26■□□□□ 0.51
Pdlim3O70209 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim3O70209 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.26■□□□□ 0.51
Pdlim3O70209 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pdlim3O70209 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim3O70209 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim3O70209 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim3O70209 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.25■□□□□ 0.51
Pdlim3O70209 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim3O70209 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pdlim3O70209 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim3O70209 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim3O70209 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim3O70209 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Pdlim3O70209 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim3O70209 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim3O70209 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms