Protein–RNA interactions for Protein: O55241

Hcrt, Orexin, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HcrtO55241 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.26■□□□□ 0.83
HcrtO55241 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HcrtO55241 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HcrtO55241 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HcrtO55241 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HcrtO55241 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HcrtO55241 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HcrtO55241 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HcrtO55241 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HcrtO55241 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.25■□□□□ 0.83
HcrtO55241 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HcrtO55241 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HcrtO55241 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HcrtO55241 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HcrtO55241 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.24■□□□□ 0.83
HcrtO55241 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HcrtO55241 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HcrtO55241 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HcrtO55241 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HcrtO55241 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HcrtO55241 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.24■□□□□ 0.83
HcrtO55241 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HcrtO55241 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.23■□□□□ 0.83
HcrtO55241 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HcrtO55241 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.23■□□□□ 0.83
HcrtO55241 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HcrtO55241 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HcrtO55241 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HcrtO55241 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HcrtO55241 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HcrtO55241 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Gm9870-201ENSMUST00000063874 645 ntBASIC20.22■□□□□ 0.83
HcrtO55241 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HcrtO55241 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HcrtO55241 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HcrtO55241 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HcrtO55241 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HcrtO55241 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HcrtO55241 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HcrtO55241 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HcrtO55241 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HcrtO55241 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HcrtO55241 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HcrtO55241 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.2■□□□□ 0.82
HcrtO55241 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.2■□□□□ 0.82
HcrtO55241 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HcrtO55241 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.2■□□□□ 0.82
HcrtO55241 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HcrtO55241 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HcrtO55241 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HcrtO55241 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HcrtO55241 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HcrtO55241 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HcrtO55241 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.19■□□□□ 0.82
HcrtO55241 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HcrtO55241 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HcrtO55241 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HcrtO55241 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HcrtO55241 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HcrtO55241 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.18■□□□□ 0.82
HcrtO55241 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.18■□□□□ 0.82
HcrtO55241 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.18■□□□□ 0.82
HcrtO55241 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HcrtO55241 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HcrtO55241 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HcrtO55241 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HcrtO55241 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HcrtO55241 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HcrtO55241 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HcrtO55241 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
HcrtO55241 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
HcrtO55241 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HcrtO55241 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HcrtO55241 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HcrtO55241 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HcrtO55241 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HcrtO55241 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HcrtO55241 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.16■□□□□ 0.82
HcrtO55241 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.16■□□□□ 0.82
HcrtO55241 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.16■□□□□ 0.82
HcrtO55241 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HcrtO55241 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HcrtO55241 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HcrtO55241 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms