Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh12O55134 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh12O55134 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh12O55134 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh12O55134 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh12O55134 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh12O55134 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Pcdh12O55134 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh12O55134 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh12O55134 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh12O55134 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdh12O55134 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh12O55134 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh12O55134 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh12O55134 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh12O55134 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh12O55134 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh12O55134 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh12O55134 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdh12O55134 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh12O55134 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh12O55134 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh12O55134 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh12O55134 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdh12O55134 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdh12O55134 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdh12O55134 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh12O55134 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdh12O55134 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh12O55134 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh12O55134 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh12O55134 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh12O55134 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.25■□□□□ 0.51
Pcdh12O55134 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.25■□□□□ 0.51
Pcdh12O55134 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh12O55134 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh12O55134 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh12O55134 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh12O55134 Gm12922-201ENSMUST00000120626 809 ntBASIC18.24■□□□□ 0.51
Pcdh12O55134 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh12O55134 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdh12O55134 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdh12O55134 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh12O55134 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh12O55134 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh12O55134 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh12O55134 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdh12O55134 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdh12O55134 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.23■□□□□ 0.51
Pcdh12O55134 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdh12O55134 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh12O55134 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh12O55134 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdh12O55134 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh12O55134 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh12O55134 Gm9847-201ENSMUST00000052528 599 ntBASIC18.22■□□□□ 0.51
Pcdh12O55134 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh12O55134 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh12O55134 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh12O55134 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh12O55134 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Pcdh12O55134 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh12O55134 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.21■□□□□ 0.51
Pcdh12O55134 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdh12O55134 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdh12O55134 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh12O55134 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdh12O55134 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh12O55134 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh12O55134 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh12O55134 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh12O55134 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh12O55134 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
Pcdh12O55134 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh12O55134 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh12O55134 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms