Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Prom1O54990 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
Prom1O54990 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Prom1O54990 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.53■■□□□ 1.2
Prom1O54990 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prom1O54990 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prom1O54990 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.53■■□□□ 1.2
Prom1O54990 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prom1O54990 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prom1O54990 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prom1O54990 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prom1O54990 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Prom1O54990 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Prom1O54990 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Prom1O54990 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Prom1O54990 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.52■■□□□ 1.2
Prom1O54990 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.52■■□□□ 1.2
Prom1O54990 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.52■■□□□ 1.2
Prom1O54990 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.52■■□□□ 1.2
Prom1O54990 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Prom1O54990 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Prom1O54990 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Prom1O54990 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.51■■□□□ 1.19
Prom1O54990 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.51■■□□□ 1.19
Prom1O54990 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prom1O54990 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prom1O54990 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prom1O54990 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prom1O54990 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Prom1O54990 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.5■■□□□ 1.19
Prom1O54990 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.5■■□□□ 1.19
Prom1O54990 Gm42642-201ENSMUST00000200683 355 ntBASIC22.5■■□□□ 1.19
Prom1O54990 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Prom1O54990 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prom1O54990 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prom1O54990 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Prom1O54990 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.5■■□□□ 1.19
Prom1O54990 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prom1O54990 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Prom1O54990 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.49■■□□□ 1.19
Prom1O54990 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.49■■□□□ 1.19
Prom1O54990 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Prom1O54990 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Prom1O54990 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Prom1O54990 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.48■■□□□ 1.19
Prom1O54990 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prom1O54990 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Prom1O54990 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Prom1O54990 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.48■■□□□ 1.19
Prom1O54990 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prom1O54990 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Prom1O54990 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prom1O54990 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Prom1O54990 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Prom1O54990 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.47■■□□□ 1.19
Prom1O54990 Gm27405-201ENSMUST00000184201 112 ntBASIC22.47■■□□□ 1.19
Prom1O54990 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prom1O54990 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prom1O54990 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Prom1O54990 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Prom1O54990 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prom1O54990 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Prom1O54990 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.46■■□□□ 1.19
Prom1O54990 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.46■■□□□ 1.19
Prom1O54990 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Prom1O54990 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.46■■□□□ 1.19
Prom1O54990 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Prom1O54990 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Prom1O54990 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Prom1O54990 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Prom1O54990 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.45■■□□□ 1.18
Prom1O54990 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Prom1O54990 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.44■■□□□ 1.18
Prom1O54990 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Prom1O54990 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Prom1O54990 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Prom1O54990 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Prom1O54990 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prom1O54990 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.43■■□□□ 1.18
Prom1O54990 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.43■■□□□ 1.18
Prom1O54990 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.42■■□□□ 1.18
Prom1O54990 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prom1O54990 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prom1O54990 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prom1O54990 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.42■■□□□ 1.18
Prom1O54990 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prom1O54990 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prom1O54990 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prom1O54990 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prom1O54990 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Prom1O54990 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.41■■□□□ 1.18
Prom1O54990 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Prom1O54990 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Prom1O54990 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Prom1O54990 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Prom1O54990 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prom1O54990 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.4■■□□□ 1.18
Prom1O54990 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prom1O54990 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prom1O54990 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 159.6 ms