Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Phox2bO35690 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Phox2bO35690 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Phox2bO35690 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Phox2bO35690 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.3■□□□□ 0.84
Phox2bO35690 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Phox2bO35690 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phox2bO35690 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Phox2bO35690 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Phox2bO35690 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.29■□□□□ 0.84
Phox2bO35690 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phox2bO35690 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phox2bO35690 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phox2bO35690 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Phox2bO35690 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
Phox2bO35690 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phox2bO35690 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Phox2bO35690 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Phox2bO35690 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Phox2bO35690 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Phox2bO35690 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.28■□□□□ 0.84
Phox2bO35690 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Phox2bO35690 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Phox2bO35690 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Phox2bO35690 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.27■□□□□ 0.84
Phox2bO35690 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.27■□□□□ 0.84
Phox2bO35690 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Phox2bO35690 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Phox2bO35690 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.27■□□□□ 0.84
Phox2bO35690 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Phox2bO35690 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Phox2bO35690 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Phox2bO35690 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Phox2bO35690 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phox2bO35690 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phox2bO35690 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Phox2bO35690 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phox2bO35690 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Phox2bO35690 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Phox2bO35690 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Phox2bO35690 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Phox2bO35690 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.26■□□□□ 0.83
Phox2bO35690 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phox2bO35690 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phox2bO35690 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phox2bO35690 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.25■□□□□ 0.83
Phox2bO35690 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.25■□□□□ 0.83
Phox2bO35690 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Phox2bO35690 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Phox2bO35690 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phox2bO35690 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Phox2bO35690 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.24■□□□□ 0.83
Phox2bO35690 Gm20760-201ENSMUST00000179197 648 ntBASIC20.24■□□□□ 0.83
Phox2bO35690 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Phox2bO35690 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phox2bO35690 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phox2bO35690 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Phox2bO35690 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Phox2bO35690 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Phox2bO35690 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Phox2bO35690 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.23■□□□□ 0.83
Phox2bO35690 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.23■□□□□ 0.83
Phox2bO35690 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phox2bO35690 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phox2bO35690 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.22■□□□□ 0.83
Phox2bO35690 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.22■□□□□ 0.83
Phox2bO35690 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phox2bO35690 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Phox2bO35690 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phox2bO35690 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phox2bO35690 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phox2bO35690 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.21■□□□□ 0.83
Phox2bO35690 Mir6982-201ENSMUST00000184354 68 ntBASIC20.21■□□□□ 0.83
Phox2bO35690 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Phox2bO35690 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phox2bO35690 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Phox2bO35690 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phox2bO35690 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phox2bO35690 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phox2bO35690 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phox2bO35690 Gm8520-201ENSMUST00000186517 868 ntBASIC20.2■□□□□ 0.82
Phox2bO35690 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC20.2■□□□□ 0.82
Phox2bO35690 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.2■□□□□ 0.82
Phox2bO35690 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phox2bO35690 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phox2bO35690 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phox2bO35690 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phox2bO35690 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phox2bO35690 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phox2bO35690 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.19■□□□□ 0.82
Phox2bO35690 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phox2bO35690 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms