Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Lhx8O35652 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Lhx8O35652 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx8O35652 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx8O35652 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx8O35652 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.43■□□□□ 0.7
Lhx8O35652 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC19.43■□□□□ 0.7
Lhx8O35652 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx8O35652 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx8O35652 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx8O35652 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx8O35652 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Lhx8O35652 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx8O35652 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lhx8O35652 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lhx8O35652 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lhx8O35652 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lhx8O35652 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lhx8O35652 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx8O35652 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.41■□□□□ 0.7
Lhx8O35652 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx8O35652 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx8O35652 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx8O35652 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.41■□□□□ 0.7
Lhx8O35652 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Lhx8O35652 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.41■□□□□ 0.7
Lhx8O35652 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Lhx8O35652 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.41■□□□□ 0.7
Lhx8O35652 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx8O35652 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lhx8O35652 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx8O35652 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx8O35652 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.4■□□□□ 0.7
Lhx8O35652 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx8O35652 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Lhx8O35652 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Lhx8O35652 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx8O35652 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx8O35652 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx8O35652 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lhx8O35652 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.39■□□□□ 0.69
Lhx8O35652 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Lhx8O35652 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx8O35652 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Lhx8O35652 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lhx8O35652 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx8O35652 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx8O35652 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.38■□□□□ 0.69
Lhx8O35652 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx8O35652 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx8O35652 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx8O35652 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx8O35652 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Lhx8O35652 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lhx8O35652 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx8O35652 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.37■□□□□ 0.69
Lhx8O35652 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx8O35652 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lhx8O35652 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx8O35652 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx8O35652 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.36■□□□□ 0.69
Lhx8O35652 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.36■□□□□ 0.69
Lhx8O35652 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx8O35652 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx8O35652 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.36■□□□□ 0.69
Lhx8O35652 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx8O35652 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.35■□□□□ 0.69
Lhx8O35652 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx8O35652 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx8O35652 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx8O35652 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.35■□□□□ 0.69
Lhx8O35652 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Lhx8O35652 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx8O35652 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx8O35652 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx8O35652 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx8O35652 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx8O35652 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms