Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.59■□□□□ 0.89
Trove2O08848 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trove2O08848 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trove2O08848 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trove2O08848 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trove2O08848 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trove2O08848 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.59■□□□□ 0.89
Trove2O08848 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trove2O08848 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trove2O08848 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trove2O08848 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trove2O08848 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.58■□□□□ 0.89
Trove2O08848 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trove2O08848 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trove2O08848 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Trove2O08848 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trove2O08848 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trove2O08848 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trove2O08848 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trove2O08848 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trove2O08848 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.57■□□□□ 0.88
Trove2O08848 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.57■□□□□ 0.88
Trove2O08848 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trove2O08848 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trove2O08848 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trove2O08848 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trove2O08848 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trove2O08848 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trove2O08848 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trove2O08848 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.56■□□□□ 0.88
Trove2O08848 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trove2O08848 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trove2O08848 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trove2O08848 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trove2O08848 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Trove2O08848 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.55■□□□□ 0.88
Trove2O08848 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trove2O08848 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trove2O08848 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trove2O08848 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trove2O08848 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trove2O08848 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.54■□□□□ 0.88
Trove2O08848 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trove2O08848 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.54■□□□□ 0.88
Trove2O08848 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.54■□□□□ 0.88
Trove2O08848 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.54■□□□□ 0.88
Trove2O08848 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trove2O08848 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trove2O08848 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trove2O08848 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.54■□□□□ 0.88
Trove2O08848 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trove2O08848 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trove2O08848 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.54■□□□□ 0.88
Trove2O08848 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trove2O08848 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trove2O08848 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trove2O08848 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trove2O08848 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trove2O08848 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trove2O08848 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.53■□□□□ 0.88
Trove2O08848 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.53■□□□□ 0.88
Trove2O08848 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trove2O08848 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trove2O08848 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trove2O08848 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trove2O08848 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Trove2O08848 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trove2O08848 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trove2O08848 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trove2O08848 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trove2O08848 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trove2O08848 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trove2O08848 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Trove2O08848 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trove2O08848 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms