Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim34bJ3QNR8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.88■■□□□ 1.57
Trim34bJ3QNR8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim34bJ3QNR8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.87■■□□□ 1.57
Trim34bJ3QNR8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.87■■□□□ 1.57
Trim34bJ3QNR8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim34bJ3QNR8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Trim34bJ3QNR8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
Trim34bJ3QNR8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim34bJ3QNR8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Trim34bJ3QNR8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Gm43060-201ENSMUST00000200621 289 ntBASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim34bJ3QNR8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Trim34bJ3QNR8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim34bJ3QNR8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Trim34bJ3QNR8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim34bJ3QNR8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Trim34bJ3QNR8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Trim34bJ3QNR8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.82■■□□□ 1.56
Trim34bJ3QNR8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim34bJ3QNR8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trim34bJ3QNR8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim34bJ3QNR8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim34bJ3QNR8 Gm5874-201ENSMUST00000096101 508 ntBASIC24.82■■□□□ 1.56
Trim34bJ3QNR8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim34bJ3QNR8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.82■■□□□ 1.56
Trim34bJ3QNR8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim34bJ3QNR8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim34bJ3QNR8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Trim34bJ3QNR8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim34bJ3QNR8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim34bJ3QNR8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 Smad6-203ENSMUST00000179458 273 ntBASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 Gm40848-201ENSMUST00000221998 324 ntBASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim34bJ3QNR8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim34bJ3QNR8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim34bJ3QNR8 Mir6236-201ENSMUST00000184437 123 ntBASIC24.79■■□□□ 1.56
Trim34bJ3QNR8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Trim34bJ3QNR8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Trim34bJ3QNR8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim34bJ3QNR8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.78■■□□□ 1.56
Trim34bJ3QNR8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.78■■□□□ 1.56
Trim34bJ3QNR8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.78■■□□□ 1.56
Trim34bJ3QNR8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim34bJ3QNR8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Trim34bJ3QNR8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Trim34bJ3QNR8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim34bJ3QNR8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim34bJ3QNR8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.76■■□□□ 1.55
Trim34bJ3QNR8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Trim34bJ3QNR8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim34bJ3QNR8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim34bJ3QNR8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim34bJ3QNR8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Trim34bJ3QNR8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim34bJ3QNR8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
Trim34bJ3QNR8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Trim34bJ3QNR8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim34bJ3QNR8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Trim34bJ3QNR8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim34bJ3QNR8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim34bJ3QNR8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim34bJ3QNR8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.74■■□□□ 1.55
Trim34bJ3QNR8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.74■■□□□ 1.55
Trim34bJ3QNR8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Trim34bJ3QNR8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim34bJ3QNR8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms