Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Zc3h13E9Q784 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Zc3h13E9Q784 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Zc3h13E9Q784 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Zc3h13E9Q784 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Zc3h13E9Q784 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Zc3h13E9Q784 AC164883.3-201ENSMUST00000227396 1774 ntBASIC28.6■■■□□ 2.17
Zc3h13E9Q784 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Zc3h13E9Q784 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Zc3h13E9Q784 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Zc3h13E9Q784 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Zc3h13E9Q784 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Zc3h13E9Q784 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Zc3h13E9Q784 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Zc3h13E9Q784 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Zc3h13E9Q784 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC28.58■■■□□ 2.17
Zc3h13E9Q784 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Zc3h13E9Q784 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.16
Zc3h13E9Q784 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.16
Zc3h13E9Q784 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Zc3h13E9Q784 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Zc3h13E9Q784 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC28.57■■■□□ 2.16
Zc3h13E9Q784 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Zc3h13E9Q784 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC28.57■■■□□ 2.16
Zc3h13E9Q784 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Zc3h13E9Q784 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Zc3h13E9Q784 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Zc3h13E9Q784 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Zc3h13E9Q784 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Zc3h13E9Q784 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Zc3h13E9Q784 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC28.55■■■□□ 2.16
Zc3h13E9Q784 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Zc3h13E9Q784 Gm42418-201ENSMUST00000182010 1831 ntBASIC28.55■■■□□ 2.16
Zc3h13E9Q784 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Zc3h13E9Q784 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Zc3h13E9Q784 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Zc3h13E9Q784 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Zc3h13E9Q784 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Zc3h13E9Q784 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Zc3h13E9Q784 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Zc3h13E9Q784 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Zc3h13E9Q784 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC28.53■■■□□ 2.16
Zc3h13E9Q784 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC28.53■■■□□ 2.16
Zc3h13E9Q784 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Zc3h13E9Q784 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
Zc3h13E9Q784 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Zc3h13E9Q784 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Zc3h13E9Q784 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Zc3h13E9Q784 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC28.51■■■□□ 2.15
Zc3h13E9Q784 Gm20760-201ENSMUST00000179197 648 ntBASIC28.51■■■□□ 2.15
Zc3h13E9Q784 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Zc3h13E9Q784 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Zc3h13E9Q784 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Zc3h13E9Q784 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC28.5■■■□□ 2.15
Zc3h13E9Q784 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
Zc3h13E9Q784 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
Zc3h13E9Q784 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Zc3h13E9Q784 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Zc3h13E9Q784 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Zc3h13E9Q784 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Zc3h13E9Q784 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Zc3h13E9Q784 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Zc3h13E9Q784 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
Zc3h13E9Q784 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC28.49■■■□□ 2.15
Zc3h13E9Q784 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Zc3h13E9Q784 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC28.49■■■□□ 2.15
Zc3h13E9Q784 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC28.49■■■□□ 2.15
Zc3h13E9Q784 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Zc3h13E9Q784 Gm22240-201ENSMUST00000175225 82 ntBASIC28.49■■■□□ 2.15
Zc3h13E9Q784 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Zc3h13E9Q784 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Zc3h13E9Q784 Gm4968-201ENSMUST00000071458 858 ntBASIC28.48■■■□□ 2.15
Zc3h13E9Q784 Gm14281-201ENSMUST00000121700 1294 ntBASIC28.47■■■□□ 2.15
Zc3h13E9Q784 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC28.47■■■□□ 2.15
Zc3h13E9Q784 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC28.47■■■□□ 2.15
Zc3h13E9Q784 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Zc3h13E9Q784 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Zc3h13E9Q784 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Zc3h13E9Q784 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Zc3h13E9Q784 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
Zc3h13E9Q784 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms