Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Gm12922-201ENSMUST00000120626 809 ntBASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4lE9Q2N0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4lE9Q2N0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4lE9Q2N0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4lE9Q2N0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cpsf4lE9Q2N0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4lE9Q2N0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4lE9Q2N0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.15■□□□□ 0.34
Cpsf4lE9Q2N0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4lE9Q2N0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.15■□□□□ 0.34
Cpsf4lE9Q2N0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4lE9Q2N0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Cpsf4lE9Q2N0 Golgb1-201ENSMUST00000023534 498 ntBASIC17.14■□□□□ 0.33
Cpsf4lE9Q2N0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4lE9Q2N0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4lE9Q2N0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4lE9Q2N0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.14■□□□□ 0.33
Cpsf4lE9Q2N0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4lE9Q2N0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4lE9Q2N0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cpsf4lE9Q2N0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4lE9Q2N0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4lE9Q2N0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4lE9Q2N0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4lE9Q2N0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4lE9Q2N0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4lE9Q2N0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.12■□□□□ 0.33
Cpsf4lE9Q2N0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4lE9Q2N0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.12■□□□□ 0.33
Cpsf4lE9Q2N0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4lE9Q2N0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4lE9Q2N0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4lE9Q2N0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4lE9Q2N0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Gm9847-201ENSMUST00000052528 599 ntBASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4lE9Q2N0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4lE9Q2N0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Cpsf4lE9Q2N0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpsf4lE9Q2N0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4lE9Q2N0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4lE9Q2N0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.09■□□□□ 0.33
Cpsf4lE9Q2N0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4lE9Q2N0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4lE9Q2N0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf4lE9Q2N0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.08■□□□□ 0.32
Cpsf4lE9Q2N0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf4lE9Q2N0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf4lE9Q2N0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf4lE9Q2N0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf4lE9Q2N0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cpsf4lE9Q2N0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms