Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm11127A7VMS2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm11127A7VMS2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm11127A7VMS2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm11127A7VMS2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm11127A7VMS2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm11127A7VMS2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm11127A7VMS2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Cap2-205ENSMUST00000225824 1634 ntBASIC17.76■□□□□ 0.43
Gm11127A7VMS2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm11127A7VMS2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.75■□□□□ 0.43
Gm11127A7VMS2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm11127A7VMS2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gm11127A7VMS2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Gm11127A7VMS2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm11127A7VMS2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm11127A7VMS2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm11127A7VMS2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Gm11127A7VMS2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm11127A7VMS2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm11127A7VMS2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm11127A7VMS2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms