Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Trav12-1A0N8R1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav12-1A0N8R1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav12-1A0N8R1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav12-1A0N8R1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav12-1A0N8R1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav12-1A0N8R1 Golph3-202ENSMUST00000226517 2359 ntBASIC16.92■□□□□ 0.3
Trav12-1A0N8R1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav12-1A0N8R1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-1A0N8R1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.89■□□□□ 0.3
Trav12-1A0N8R1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav12-1A0N8R1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-1A0N8R1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-1A0N8R1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-1A0N8R1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-1A0N8R1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-1A0N8R1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-1A0N8R1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav12-1A0N8R1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-1A0N8R1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-1A0N8R1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.88■□□□□ 0.29
Trav12-1A0N8R1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-1A0N8R1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.88■□□□□ 0.29
Trav12-1A0N8R1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav12-1A0N8R1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-1A0N8R1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-1A0N8R1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-1A0N8R1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Trav12-1A0N8R1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12-1A0N8R1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12-1A0N8R1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav12-1A0N8R1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12-1A0N8R1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12-1A0N8R1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12-1A0N8R1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav12-1A0N8R1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Gm10399-202ENSMUST00000202768 748 ntBASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-1A0N8R1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-1A0N8R1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav12-1A0N8R1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-1A0N8R1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav12-1A0N8R1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-1A0N8R1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-1A0N8R1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms