Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Gm3880A0A1B0GSB3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm3880A0A1B0GSB3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm3880A0A1B0GSB3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Rarb-207ENSMUST00000225921 2756 ntBASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm3880A0A1B0GSB3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Snhg20-203ENSMUST00000182811 2153 ntBASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm3880A0A1B0GSB3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms