Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb8A0A140LI48 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdhgb8A0A140LI48 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb8A0A140LI48 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb8A0A140LI48 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb8A0A140LI48 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb8A0A140LI48 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb8A0A140LI48 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdhgb8A0A140LI48 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb8A0A140LI48 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhgb8A0A140LI48 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb8A0A140LI48 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb8A0A140LI48 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb8A0A140LI48 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb8A0A140LI48 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb8A0A140LI48 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhgb8A0A140LI48 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb8A0A140LI48 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhgb8A0A140LI48 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb8A0A140LI48 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb8A0A140LI48 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.07■□□□□ 0.48
Pcdhgb8A0A140LI48 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 Gm7417-201ENSMUST00000192950 473 ntBASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb8A0A140LI48 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Gm10399-202ENSMUST00000202768 748 ntBASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb8A0A140LI48 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Gm40881-201ENSMUST00000223397 166 ntBASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb8A0A140LI48 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb8A0A140LI48 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms