Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav23A0A0G2JG17 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.45■□□□□ 0.22
Trav23A0A0G2JG17 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav23A0A0G2JG17 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav23A0A0G2JG17 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav23A0A0G2JG17 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav23A0A0G2JG17 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav23A0A0G2JG17 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav23A0A0G2JG17 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav23A0A0G2JG17 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav23A0A0G2JG17 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav23A0A0G2JG17 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav23A0A0G2JG17 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav23A0A0G2JG17 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav23A0A0G2JG17 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Trav23A0A0G2JG17 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav23A0A0G2JG17 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav23A0A0G2JG17 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav23A0A0G2JG17 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav23A0A0G2JG17 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav23A0A0G2JG17 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav23A0A0G2JG17 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav23A0A0G2JG17 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav23A0A0G2JG17 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav23A0A0G2JG17 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav23A0A0G2JG17 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav23A0A0G2JG17 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Gm9847-201ENSMUST00000052528 599 ntBASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav23A0A0G2JG17 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms