Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-1A0A0G2JEV5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-1A0A0G2JEV5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav7-1A0A0G2JEV5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-1A0A0G2JEV5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-1A0A0G2JEV5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-1A0A0G2JEV5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-1A0A0G2JEV5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-1A0A0G2JEV5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-1A0A0G2JEV5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-1A0A0G2JEV5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-1A0A0G2JEV5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-1A0A0G2JEV5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-1A0A0G2JEV5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav7-1A0A0G2JEV5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-1A0A0G2JEV5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-1A0A0G2JEV5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-1A0A0G2JEV5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7-1A0A0G2JEV5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav7-1A0A0G2JEV5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav7-1A0A0G2JEV5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7-1A0A0G2JEV5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms