Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Dapk1-207ENSMUST00000226059 5009 ntBASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv8-28A0A0G2JE47 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 AC154454.1-201ENSMUST00000225253 216 ntBASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv8-28A0A0G2JE47 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv8-28A0A0G2JE47 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Hsf1-204ENSMUST00000226872 2104 ntBASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Gm12818-201ENSMUST00000117562 1349 ntBASIC12.62□□□□□ -0.39
Igkv8-28A0A0G2JE47 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv8-28A0A0G2JE47 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms