Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Etf1-202ENSMUST00000180351 108 ntBASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Gm7417-201ENSMUST00000192950 473 ntBASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms