Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv13-1A0A0B4J1P8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.96□□□□□ -0.01
Trbv13-1A0A0B4J1P8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Iqck-206ENSMUST00000208658 2891 ntBASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Gm12922-201ENSMUST00000120626 809 ntBASIC14.93□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.93□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.91□□□□□ -0.02
Trbv13-1A0A0B4J1P8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms