Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Gm37136-201ENSMUST00000194368 194 ntBASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Zfp131-205ENSMUST00000223812 663 ntBASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tcrg-V4A0A0B4J1J8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Tcrg-V4A0A0B4J1J8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tcrg-V4A0A0B4J1J8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tcrg-V4A0A0B4J1J8 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.08■□□□□ 0
Tcrg-V4A0A0B4J1J8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tcrg-V4A0A0B4J1J8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcrg-V4A0A0B4J1J8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcrg-V4A0A0B4J1J8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Tcrg-V4A0A0B4J1J8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms