Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Gm15546-201ENSMUST00000122095 826 ntBASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.02■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv4-50A0A0B4J1J0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Igkv4-50A0A0B4J1J0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Gm7417-201ENSMUST00000192950 473 ntBASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-50A0A0B4J1J0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv4-50A0A0B4J1J0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.96■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-50A0A0B4J1J0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms