Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv19A0A0B4J1H4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv19A0A0B4J1H4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv19A0A0B4J1H4 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.21■□□□□ 0.18
Trbv19A0A0B4J1H4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv19A0A0B4J1H4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv19A0A0B4J1H4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv19A0A0B4J1H4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv19A0A0B4J1H4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv19A0A0B4J1H4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv19A0A0B4J1H4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.19■□□□□ 0.18
Trbv19A0A0B4J1H4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv19A0A0B4J1H4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv19A0A0B4J1H4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv19A0A0B4J1H4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv19A0A0B4J1H4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Gm40881-201ENSMUST00000223397 166 ntBASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv19A0A0B4J1H4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv19A0A0B4J1H4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv19A0A0B4J1H4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms