Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.77■□□□□ 0.12
Trbv13-3A0A0B4J1H2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.77■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trbv13-3A0A0B4J1H2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.74■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gm8503-201ENSMUST00000118131 455 ntBASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trbv13-3A0A0B4J1H2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms