Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-9A0A0A6YW37 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Ighv1-9A0A0A6YW37 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-9A0A0A6YW37 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-9A0A0A6YW37 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-9A0A0A6YW37 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-9A0A0A6YW37 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-9A0A0A6YW37 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-9A0A0A6YW37 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Ighv1-9A0A0A6YW37 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-9A0A0A6YW37 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-9A0A0A6YW37 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-9A0A0A6YW37 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-9A0A0A6YW37 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-9A0A0A6YW37 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv1-9A0A0A6YW37 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-9A0A0A6YW37 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms