Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28897A0A087WP44 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28897A0A087WP44 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28897A0A087WP44 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.85■□□□□ 0.45
Gm28897A0A087WP44 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28897A0A087WP44 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28897A0A087WP44 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Gm28897A0A087WP44 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28897A0A087WP44 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28897A0A087WP44 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Gm28897A0A087WP44 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.83■□□□□ 0.44
Gm28897A0A087WP44 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28897A0A087WP44 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28897A0A087WP44 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28897A0A087WP44 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gm28897A0A087WP44 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Gm28897A0A087WP44 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28897A0A087WP44 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Scarna2-201ENSMUST00000157560 414 ntBASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28897A0A087WP44 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Gm16437-201ENSMUST00000025669 507 ntBASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28897A0A087WP44 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Gm11687-201ENSMUST00000118911 886 ntBASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28897A0A087WP44 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Iqck-206ENSMUST00000208658 2891 ntBASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28897A0A087WP44 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gm28897A0A087WP44 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28897A0A087WP44 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28897A0A087WP44 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28897A0A087WP44 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28897A0A087WP44 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms