Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Golph3-202ENSMUST00000226517 2359 ntBASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trdv1A0A075B657 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trdv1A0A075B657 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.37■□□□□ 0.05
Trdv1A0A075B657 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Gm10420-201ENSMUST00000121713 882 ntBASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv1A0A075B657 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 Iqck-206ENSMUST00000208658 2891 ntBASIC15.35■□□□□ 0.05
Trdv1A0A075B657 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trdv1A0A075B657 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv1A0A075B657 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trdv1A0A075B657 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv1A0A075B657 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trdv1A0A075B657 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv1A0A075B657 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms