Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.52■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav15-2-dv6-2A0A075B650 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.51■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.51■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Gm11175-201ENSMUST00000116172 543 ntBASIC16.46■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-2-dv6-2A0A075B650 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gm10420-201ENSMUST00000121713 882 ntBASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms