Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav12-3A0A075B648 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-3A0A075B648 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-3A0A075B648 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-3A0A075B648 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-3A0A075B648 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-3A0A075B648 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-3A0A075B648 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-3A0A075B648 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav12-3A0A075B648 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-3A0A075B648 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-3A0A075B648 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-3A0A075B648 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-3A0A075B648 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12-3A0A075B648 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12-3A0A075B648 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav12-3A0A075B648 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav12-3A0A075B648 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-3A0A075B648 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-3A0A075B648 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-3A0A075B648 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav12-3A0A075B648 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-3A0A075B648 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12-3A0A075B648 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav12-3A0A075B648 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-3A0A075B648 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-3A0A075B648 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-3A0A075B648 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-3A0A075B648 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.71□□□□□ -0.05
Trav12-3A0A075B648 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12-3A0A075B648 Gm24804-201ENSMUST00000174982 85 ntBASIC14.71□□□□□ -0.05
Trav12-3A0A075B648 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-3A0A075B648 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-3A0A075B648 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-3A0A075B648 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12-3A0A075B648 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12-3A0A075B648 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms