Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav16d-dv11A0A075B617 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav16d-dv11A0A075B617 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav16d-dv11A0A075B617 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
Trav16d-dv11A0A075B617 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.83□□□□□ -0.03
Trav16d-dv11A0A075B617 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.83□□□□□ -0.03
Trav16d-dv11A0A075B617 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav16d-dv11A0A075B617 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav16d-dv11A0A075B617 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16d-dv11A0A075B617 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16d-dv11A0A075B617 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav16d-dv11A0A075B617 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16d-dv11A0A075B617 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16d-dv11A0A075B617 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav16d-dv11A0A075B617 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16d-dv11A0A075B617 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav16d-dv11A0A075B617 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav16d-dv11A0A075B617 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav16d-dv11A0A075B617 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav16d-dv11A0A075B617 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav16d-dv11A0A075B617 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16d-dv11A0A075B617 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16d-dv11A0A075B617 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16d-dv11A0A075B617 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16d-dv11A0A075B617 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav16d-dv11A0A075B617 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16d-dv11A0A075B617 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16d-dv11A0A075B617 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16d-dv11A0A075B617 Gm8503-201ENSMUST00000118131 455 ntBASIC14.77□□□□□ -0.05
Trav16d-dv11A0A075B617 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.77□□□□□ -0.05
Trav16d-dv11A0A075B617 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16d-dv11A0A075B617 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16d-dv11A0A075B617 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16d-dv11A0A075B617 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Trav16d-dv11A0A075B617 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16d-dv11A0A075B617 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16d-dv11A0A075B617 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms