Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Terc-201ENSMUST00000082862 423 ntBASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4n-4A0A075B615 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4n-4A0A075B615 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav4n-4A0A075B615 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4n-4A0A075B615 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4n-4A0A075B615 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav4n-4A0A075B615 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4n-4A0A075B615 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav4n-4A0A075B615 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav4n-4A0A075B615 Nkain2-201ENSMUST00000092602 558 ntBASIC14.02□□□□□ -0.17
Trav4n-4A0A075B615 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav4n-4A0A075B615 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4n-4A0A075B615 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav4n-4A0A075B615 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4n-4A0A075B615 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4n-4A0A075B615 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav4n-4A0A075B615 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trav4n-4A0A075B615 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4n-4A0A075B615 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav4n-4A0A075B615 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Gm4799-201ENSMUST00000095396 657 ntBASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4n-4A0A075B615 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms