Protein–RNA interactions for Protein: A0A075B5T0

Ighv3-8, Immunoglobulin heavy variable V3-8 (Fragment), mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-8A0A075B5T0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-8A0A075B5T0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv3-8A0A075B5T0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-8A0A075B5T0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv3-8A0A075B5T0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-8A0A075B5T0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-8A0A075B5T0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-8A0A075B5T0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv3-8A0A075B5T0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv3-8A0A075B5T0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv3-8A0A075B5T0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-8A0A075B5T0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-8A0A075B5T0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv3-8A0A075B5T0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-8A0A075B5T0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-8A0A075B5T0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-8A0A075B5T0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-8A0A075B5T0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv3-8A0A075B5T0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv3-8A0A075B5T0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-8A0A075B5T0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv3-8A0A075B5T0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv3-8A0A075B5T0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv3-8A0A075B5T0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.15■□□□□ 0.02
Ighv3-8A0A075B5T0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms