Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm11957-201ENSMUST00000118304 779 ntBASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm14993-201ENSMUST00000121180 164 ntBASIC9.85□□□□□ -0.83
Scrt1Q99M85 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm25554-201ENSMUST00000158075 113 ntBASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm25830-201ENSMUST00000158923 132 ntBASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm43275-201ENSMUST00000202053 1020 ntBASIC9.85□□□□□ -0.83
Scrt1Q99M85 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.85□□□□□ -0.83
Scrt1Q99M85 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.85□□□□□ -0.83
Scrt1Q99M85 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gm5513-201ENSMUST00000072982 1218 ntBASIC9.85□□□□□ -0.83
Scrt1Q99M85 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.85□□□□□ -0.83
Scrt1Q99M85 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm11996-201ENSMUST00000117538 915 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm11500-201ENSMUST00000118237 601 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm9673-201ENSMUST00000119287 781 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm14497-201ENSMUST00000119537 580 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm12274-201ENSMUST00000120062 385 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm37365-201ENSMUST00000193109 409 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm43854-201ENSMUST00000200418 394 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm44216-201ENSMUST00000203942 157 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm45085-201ENSMUST00000209100 441 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 AC138716.2-201ENSMUST00000226670 1016 ntBASIC9.84□□□□□ -0.83
Scrt1Q99M85 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Scrt1Q99M85 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms